Multiplex Nanoparticle-Assisted PCR (NanoPCR) for Detection of Clinically Important Bacterial and Fungal Pathogens


Aslan K., Erden Kopar E., Evran S.

Molbiyokon’18, İzmir, Türkiye, 5 - 08 Eylül 2018, ss.90

  • Yayın Türü: Bildiri / Özet Bildiri
  • Basıldığı Şehir: İzmir
  • Basıldığı Ülke: Türkiye
  • Sayfa Sayıları: ss.90
  • Atatürk Üniversitesi Adresli: Hayır

Özet

Nano-PCR is a technique that uses the physicochemical properties of nanomaterials in order to enhance specificity and sensitivity of PCR. Several studies showed the potential application of nanoparticles (NPs) for detection of bacterial, parasitic, and viral infections. However, to our knowledge, NPs have not been used to detect fungal and bacterial pathogens in a single PCR. Here, we aimed to develop and optimize a novel multiplex nano-PCR assay for detection of health-threatening fungal and bacterial strains. For this bpurpose, conserved regions in the genomes of pathogens were amplified using the species-spesific primers by multiplex PCR. After confirmation of PCR products by agarose gel electrophoresis, multiplex nano-PCR was performed in the presence of gold NPs, quantum dots, and metal NPs. The effect of each nanoparticle on PCR was evaluated by comparing the PCR cycle number, limit of detection, and amplification efficiency. In conclusion, we developed an effective tool serving as spesific, sensitive and faster alternative to conventional pathogen detection methods